IL_9QLO_086
3D structure
- PDB id
- 9QLO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NMT1-NAC bound human RNC with full length ARF1 - State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- GGUU*AC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QLO_086 not in the Motif Atlas
- Geometric match to IL_8GLP_089
- Geometric discrepancy: 0.0584
- The information below is about IL_8GLP_089
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_74641.5
- Basepair signature
- cWW-tSH-cWW-L
- Number of instances in this motif group
- 37
Unit IDs
9QLO|1|L5|G|2406
9QLO|1|L5|G|2407
9QLO|1|L5|U|2408
9QLO|1|L5|U|2409
*
9QLO|1|L5|A|2783
9QLO|1|L5|C|2784
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LX
- 60S ribosomal protein L23a
- Chain Lg
- 60S ribosomal protein L34
- Chain Lj
- Large ribosomal subunit protein eL37
- Chain Ll
- 60S ribosomal protein L39
Coloring options: