3D structure

PDB id
9QLO (explore in PDB, NAKB, or RNA 3D Hub)
Description
NMT1-NAC bound human RNC with full length ARF1 - State 1
Experimental method
ELECTRON MICROSCOPY
Resolution
2.47 Å

Loop

Sequence
CUGAG*CGAAAG
Length
11 nucleotides
Bulged bases
9QLO|1|L5|A|2512, 9QLO|1|L5|A|2513
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9QLO|1|L5|C|2446
9QLO|1|L5|U|2447
9QLO|1|L5|G|2448
9QLO|1|L5|A|2449
9QLO|1|L5|G|2450
*
9QLO|1|L5|C|2509
9QLO|1|L5|G|2510
9QLO|1|L5|A|2511
9QLO|1|L5|A|2512
9QLO|1|L5|A|2513
9QLO|1|L5|G|2514

Current chains

Chain L5
28S rRNA

Nearby chains

Chain L8
5.8S ribosomal RNA; 5.8S rRNA
Chain LA
60S ribosomal protein L8
Chain Lg
60S ribosomal protein L34
Chain Lj
Large ribosomal subunit protein eL37
Chain Ll
60S ribosomal protein L39

Coloring options:

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