IL_9QLO_108

3D structure

PDB id

9QLO (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

CGAAGG*UGUUGACG

Length

14 nucleotides

Bulged bases

9QLO|1|L5|A|3663, 9QLO|1|L5|U|3679, 9QLO|1|L5|C|3683

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QLO|1|L5|C|3660
9QLO|1|L5|G|3661
9QLO|1|L5|A|3662
9QLO|1|L5|A|3663
9QLO|1|L5|G|3664
9QLO|1|L5|G|3665
*
9QLO|1|L5|U|3677
9QLO|1|L5|G|3678
9QLO|1|L5|U|3679
9QLO|1|L5|U|3680
9QLO|1|L5|G|3681
9QLO|1|L5|A|3682
9QLO|1|L5|C|3683
9QLO|1|L5|G|3684

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LA

60S ribosomal protein L8

Chain Lp

60S ribosomal protein L37a

Chain S2

Small subunit ribosomal RNA; SSU rRNA