IL_9QLO_135
3D structure
- PDB id
- 9QLO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NMT1-NAC bound human RNC with full length ARF1 - State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- CU*AACG
- Length
- 6 nucleotides
- Bulged bases
- 9QLO|1|L5|A|4518, 9QLO|1|L5|C|4519
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QLO_135 not in the Motif Atlas
- Homologous match to IL_9PN5_104
- Geometric discrepancy: 0.069
- The information below is about IL_9PN5_104
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44609.5
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 24
Unit IDs
9QLO|1|L5|C|4458
9QLO|1|L5|U|4459
*
9QLO|1|L5|A|4517
9QLO|1|L5|A|4518
9QLO|1|L5|C|4519
9QLO|1|L5|G|4520
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain CR
- Eukaryotic peptide chain release factor subunit 1
- Chain LB
- 60S ribosomal protein L3
- Chain LO
- 60S ribosomal protein L13a
- Chain LV
- 60S ribosomal protein L23
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