IL_9QLO_181
3D structure
- PDB id
- 9QLO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NMT1-NAC bound human RNC with full length ARF1 - State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- GUU*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QLO_181 not in the Motif Atlas
- Geometric match to IL_4TS2_004
- Geometric discrepancy: 0.1524
- The information below is about IL_4TS2_004
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_71625.6
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 81
Unit IDs
9QLO|1|S2|G|108
9QLO|1|S2|U|109
9QLO|1|S2|U|110
*
9QLO|1|S2|G|351
9QLO|1|S2|U|352
9QLO|1|S2|C|353
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SE
- Small ribosomal subunit protein eS4, X isoform
- Chain SI
- 40S ribosomal protein S8
- Chain SL
- 40S ribosomal protein S11
Coloring options: