IL_9QLO_193

3D structure

PDB id

9QLO (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

GGG*CGAUUC

Length

9 nucleotides

Bulged bases

9QLO|1|S2|U|428

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QLO_193 not in the Motif Atlas

Homologous match to IL_9H3G_175

Geometric discrepancy: 0.1328

The information below is about IL_9H3G_175

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_93336.4

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

6

Unit IDs

9QLO|1|S2|G|411
9QLO|1|S2|G|412
9QLO|1|S2|G|413
*
9QLO|1|S2|C|424
9QLO|1|S2|G|425
9QLO|1|S2|A|426
9QLO|1|S2|U|427
9QLO|1|S2|U|428
9QLO|1|S2|C|429

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SE

Small ribosomal subunit protein eS4, X isoform

Chain SJ

40S ribosomal protein S9

Chain SX

40S ribosomal protein S23