IL_9QLO_232

3D structure

PDB id

9QLO (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

ACAGGAUUG*CUCGAUU

Length

16 nucleotides

Bulged bases

9QLO|1|S2|G|1285

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QLO|1|S2|A|1282
9QLO|1|S2|C|1283
9QLO|1|S2|A|1284
9QLO|1|S2|G|1285
9QLO|1|S2|G|1286
9QLO|1|S2|A|1287
9QLO|1|S2|U|1288
9QLO|1|S2|U|1289
9QLO|1|S2|G|1290
*
9QLO|1|S2|C|1309
9QLO|1|S2|U|1310
9QLO|1|S2|C|1311
9QLO|1|S2|G|1312
9QLO|1|S2|A|1313
9QLO|1|S2|U|1314
9QLO|1|S2|U|1315

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SK

40S ribosomal protein S10

Chain SM

40S ribosomal protein S12

Chain Sd

40S ribosomal protein S29

Chain Sf

Ubiquitin