3D structure

PDB id
9QLQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
NMT1-NAC bound human RNC with full length ARF1 - alternative State
Experimental method
ELECTRON MICROSCOPY
Resolution
2.57 Å

Loop

Sequence
GAAC*GAGUUCAAGAGGGC
Length
18 nucleotides
Bulged bases
9QLQ|1|L5|G|409, 9QLQ|1|L5|G|413
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9QLQ|1|L5|G|387
9QLQ|1|L5|A|388
9QLQ|1|L5|A|389
9QLQ|1|L5|C|390
*
9QLQ|1|L5|G|401
9QLQ|1|L5|A|402
9QLQ|1|L5|G|403
9QLQ|1|L5|U|404
9QLQ|1|L5|U|405
9QLQ|1|L5|C|406
9QLQ|1|L5|A|407
9QLQ|1|L5|A|408
9QLQ|1|L5|G|409
9QLQ|1|L5|A|410
9QLQ|1|L5|G|411
9QLQ|1|L5|G|412
9QLQ|1|L5|G|413
9QLQ|1|L5|C|414

Current chains

Chain L5
28S rRNA

Nearby chains

Chain CZ
ADP-ribosylation factor 1
Chain L8
5.8S ribosomal RNA; 5.8S rRNA
Chain LP
60S ribosomal protein L17
Chain LY
60S ribosomal protein L26
Chain Ll
60S ribosomal protein L39
Chain NM
Glycylpeptide N-tetradecanoyltransferase 1

Coloring options:

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