IL_9QLQ_025

3D structure

PDB id

9QLQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - alternative State

Experimental method

ELECTRON MICROSCOPY

Resolution

2.57 Å

Loop

Sequence

GUGUCGGCGGCCCGG*UCCCCCGACC

Length

25 nucleotides

Bulged bases

9QLQ|1|L5|C|501, 9QLQ|1|L5|C|502, 9QLQ|1|L5|C|503, 9QLQ|1|L5|G|504

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QLQ|1|L5|G|491
9QLQ|1|L5|U|492
9QLQ|1|L5|G|493
9QLQ|1|L5|U|494
9QLQ|1|L5|C|495
9QLQ|1|L5|G|496
9QLQ|1|L5|G|497
9QLQ|1|L5|C|498
9QLQ|1|L5|G|499
9QLQ|1|L5|G|500
9QLQ|1|L5|C|501
9QLQ|1|L5|C|502
9QLQ|1|L5|C|503
9QLQ|1|L5|G|504
9QLQ|1|L5|G|505
*
9QLQ|1|L5|U|653
9QLQ|1|L5|C|654
9QLQ|1|L5|C|655
9QLQ|1|L5|C|656
9QLQ|1|L5|C|657
9QLQ|1|L5|C|658
9QLQ|1|L5|G|659
9QLQ|1|L5|A|660
9QLQ|1|L5|C|661
9QLQ|1|L5|C|662

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LQ

60S ribosomal protein L18