IL_9QLQ_031

3D structure

PDB id

9QLQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - alternative State

Experimental method

ELECTRON MICROSCOPY

Resolution

2.57 Å

Loop

Sequence

AAGG*CAGCAGCACU

Length

14 nucleotides

Bulged bases

9QLQ|1|L5|A|932, 9QLQ|1|L5|C|934, 9QLQ|1|L5|A|935, 9QLQ|1|L5|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QLQ|1|L5|A|732
9QLQ|1|L5|A|733
9QLQ|1|L5|G|734
9QLQ|1|L5|G|735
*
9QLQ|1|L5|C|928
9QLQ|1|L5|A|929
9QLQ|1|L5|G|930
9QLQ|1|L5|C|931
9QLQ|1|L5|A|932
9QLQ|1|L5|G|933
9QLQ|1|L5|C|934
9QLQ|1|L5|A|935
9QLQ|1|L5|C|936
9QLQ|1|L5|U|937

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a