IL_9QLQ_196

3D structure

PDB id

9QLQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - alternative State

Experimental method

ELECTRON MICROSCOPY

Resolution

2.57 Å

Loop

Sequence

UC*GGA

Length

5 nucleotides

Bulged bases

9QLQ|1|S2|G|507

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QLQ_196 not in the Motif Atlas

Homologous match to IL_9PN5_166

Geometric discrepancy: 0.0808

The information below is about IL_9PN5_166

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.5

Basepair signature

cWW-L-cWW

Number of instances in this motif group

83

Unit IDs

9QLQ|1|S2|U|495
9QLQ|1|S2|C|496
*
9QLQ|1|S2|G|506
9QLQ|1|S2|G|507
9QLQ|1|S2|A|508

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SE

Small ribosomal subunit protein eS4, X isoform

Chain SJ

40S ribosomal protein S9

Chain SY

40S ribosomal protein S24