IL_9QOH_054

3D structure

PDB id

9QOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

(OMG)A(A2M)AG*CUAGUAGC

Length

13 nucleotides

Bulged bases

9QOH|1|A2|A|1463, 9QOH|1|A2|G|1467

QA status

Modified nucleotides: OMG, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QOH|1|A2|OMG|1335
9QOH|1|A2|A|1336
9QOH|1|A2|A2M|1337
9QOH|1|A2|A|1338
9QOH|1|A2|G|1339
*
9QOH|1|A2|C|1461
9QOH|1|A2|U|1462
9QOH|1|A2|A|1463
9QOH|1|A2|G|1464
9QOH|1|A2|U|1465
9QOH|1|A2|A|1466
9QOH|1|A2|G|1467
9QOH|1|A2|C|1468

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain F1

Large ribosomal subunit protein eL13

Chain F2

Large ribosomal subunit protein uL4

Chain H1

Large ribosomal subunit protein eL15

Chain U2

Large ribosomal subunit protein uL15

Chain d2

Large ribosomal subunit protein eL37