IL_9QOH_065

3D structure

PDB id

9QOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CCGGUAA*UAAAUGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QOH|1|A2|C|1533
9QOH|1|A2|C|1534
9QOH|1|A2|G|1535
9QOH|1|A2|G|1536
9QOH|1|A2|U|1537
9QOH|1|A2|A|1538
9QOH|1|A2|A|1539
*
9QOH|1|A2|U|1594
9QOH|1|A2|A|1595
9QOH|1|A2|A|1596
9QOH|1|A2|A|1597
9QOH|1|A2|U|1598
9QOH|1|A2|G|1599
9QOH|1|A2|G|1600

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain A1

Large ribosomal subunit protein uL30

Chain B2

5S ribosomal RNA; 5S rRNA

Chain D1

Large ribosomal subunit protein uL16

Chain N2

Large ribosomal subunit protein eL21