IL_9QOH_080
3D structure
- PDB id
- 9QOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome POST translocation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- GACCCCAGAAAA*UGAAAAUGGAUGGCGC
- Length
- 28 nucleotides
- Bulged bases
- 9QOH|1|A2|C|1737, 9QOH|1|A2|A|1843, 9QOH|1|A2|U|1846, 9QOH|1|A2|G|1847
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QOH|1|A2|G|1735
9QOH|1|A2|A|1736
9QOH|1|A2|C|1737
9QOH|1|A2|C|1738
9QOH|1|A2|C|1739
9QOH|1|A2|C|1740
9QOH|1|A2|A|1741
9QOH|1|A2|G|1742
9QOH|1|A2|A|1743
9QOH|1|A2|A|1744
9QOH|1|A2|A|1745
9QOH|1|A2|A|1746
*
9QOH|1|A2|U|1840
9QOH|1|A2|G|1841
9QOH|1|A2|A|1842
9QOH|1|A2|A|1843
9QOH|1|A2|A|1844
9QOH|1|A2|A|1845
9QOH|1|A2|U|1846
9QOH|1|A2|G|1847
9QOH|1|A2|G|1848
9QOH|1|A2|A|1849
9QOH|1|A2|U|1850
9QOH|1|A2|G|1851
9QOH|1|A2|G|1852
9QOH|1|A2|C|1853
9QOH|1|A2|G|1854
9QOH|1|A2|C|1855
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain B2
- 5S ribosomal RNA; 5S rRNA
- Chain D1
- Large ribosomal subunit protein uL16
- Chain E2
- Large ribosomal subunit protein uL3
- Chain I2
- Large ribosomal subunit protein uL13
- Chain Z2
- Large ribosomal subunit protein eL33
- Chain g2
- Ubiquitin-ribosomal protein eL40 fusion protein
Coloring options: