3D structure

PDB id
9QOH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mouse Ribosome POST translocation state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.78 Å

Loop

Sequence
GAAAAAAUU*ACCGCAGC
Length
17 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9QOH|1|m2|G|809
9QOH|1|m2|A|810
9QOH|1|m2|A|811
9QOH|1|m2|A|812
9QOH|1|m2|A|813
9QOH|1|m2|A|814
9QOH|1|m2|A|815
9QOH|1|m2|U|816
9QOH|1|m2|U|817
*
9QOH|1|m2|A|851
9QOH|1|m2|C|852
9QOH|1|m2|C|853
9QOH|1|m2|G|854
9QOH|1|m2|C|855
9QOH|1|m2|A|856
9QOH|1|m2|G|857
9QOH|1|m2|C|858

Current chains

Chain m2
18S ribosomal RNA

Nearby chains

Chain L3
Small ribosomal subunit protein uS4
Chain P3
Small ribosomal subunit protein uS8
Chain r2
Small ribosomal subunit protein eS4
Chain w2
Small ribosomal subunit protein uS17

Coloring options:

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