IL_9QQP_031

3D structure

PDB id

9QQP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

AAG*CGCGCUUUU

Length

12 nucleotides

Bulged bases

9QQP|1|A2|G|830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQP|1|A2|A|739
9QQP|1|A2|A|740
9QQP|1|A2|G|741
*
9QQP|1|A2|C|827
9QQP|1|A2|G|828
9QQP|1|A2|C|829
9QQP|1|A2|G|830
9QQP|1|A2|C|831
9QQP|1|A2|U|832
9QQP|1|A2|U|833
9QQP|1|A2|U|834
9QQP|1|A2|U|835

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain F2

Large ribosomal subunit protein uL4

Chain G1

Large ribosomal subunit protein eL14

Chain M2

Large ribosomal subunit protein eL20