IL_9QQP_042

3D structure

PDB id

9QQP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGAUC*GCGCAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQP|1|A2|G|1238
9QQP|1|A2|G|1239
9QQP|1|A2|A|1240
9QQP|1|A2|U|1241
9QQP|1|A2|C|1242
*
9QQP|1|A2|G|1268
9QQP|1|A2|C|1269
9QQP|1|A2|G|1270
9QQP|1|A2|C|1271
9QQP|1|A2|A|1272
9QQP|1|A2|C|1273

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain K2

Large ribosomal subunit protein eL18

Chain V2

Large ribosomal subunit protein eL29