IL_9QQP_075

3D structure

PDB id

9QQP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UAUAGACAG*CCGAA

Length

14 nucleotides

Bulged bases

9QQP|1|A2|A|1762

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQP|1|A2|U|1759
9QQP|1|A2|A|1760
9QQP|1|A2|U|1761
9QQP|1|A2|A|1762
9QQP|1|A2|G|1763
9QQP|1|A2|A|1764
9QQP|1|A2|C|1765
9QQP|1|A2|A|1766
9QQP|1|A2|G|1767
*
9QQP|1|A2|C|1824
9QQP|1|A2|C|1825
9QQP|1|A2|G|1826
9QQP|1|A2|A|1827
9QQP|1|A2|A|1828

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain g2

Ubiquitin-ribosomal protein eL40 fusion protein