IL_9QQP_104

3D structure

PDB id

9QQP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

C(OMC)AG*CG

Length

6 nucleotides

Bulged bases

9QQP|1|A2|OMC|3357

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQP|1|A2|C|3356
9QQP|1|A2|OMC|3357
9QQP|1|A2|A|3358
9QQP|1|A2|G|3359
*
9QQP|1|A2|C|3405
9QQP|1|A2|G|3406

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain D2

Large ribosomal subunit protein uL2

Chain m2

Small subunit ribosomal RNA; SSU rRNA