3D structure

PDB id
9QQP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mouse Ribosome rotated-2 PRE state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.8 Å

Loop

Sequence
(PSU)UG*UG
Length
5 nucleotides
Bulged bases
None detected
QA status
Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9QQP|1|A2|PSU|4055
9QQP|1|A2|U|4056
9QQP|1|A2|G|4057
*
9QQP|1|A2|U|4091
9QQP|1|A2|G|4092

Current chains

Chain A2
28S ribosomal RNA

Nearby chains

Chain D1
Large ribosomal subunit protein uL16

Coloring options:

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