IL_9QQP_199
3D structure
- PDB id
- 9QQP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome rotated-2 PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- G(PSU)GCCAG*CGGUAAUUC
- Length
- 16 nucleotides
- Bulged bases
- 9QQP|1|m2|A|630, 9QQP|1|m2|U|632, 9QQP|1|m2|U|633
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QQP|1|m2|G|613
9QQP|1|m2|PSU|614
9QQP|1|m2|G|615
9QQP|1|m2|C|616
9QQP|1|m2|C|617
9QQP|1|m2|A|618
9QQP|1|m2|G|619
*
9QQP|1|m2|C|626
9QQP|1|m2|G|627
9QQP|1|m2|G|628
9QQP|1|m2|U|629
9QQP|1|m2|A|630
9QQP|1|m2|A|631
9QQP|1|m2|U|632
9QQP|1|m2|U|633
9QQP|1|m2|C|634
Current chains
- Chain m2
- 18S ribosomal RNA
Nearby chains
- Chain Bv
- Transfer RNA; tRNA
- Chain Bx
- messenger RNA
- Chain E3
- Small ribosomal subunit protein uS12
- Chain T3
- Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein
- Chain q2
- Small ribosomal subunit protein uS3
Coloring options: