IL_9QQP_213

3D structure

PDB id

9QQP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GCUAG*CUUGGACC

Length

13 nucleotides

Bulged bases

9QQP|1|m2|G|972

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQP|1|m2|G|954
9QQP|1|m2|C|955
9QQP|1|m2|U|956
9QQP|1|m2|A|957
9QQP|1|m2|G|958
*
9QQP|1|m2|C|969
9QQP|1|m2|U|970
9QQP|1|m2|U|971
9QQP|1|m2|G|972
9QQP|1|m2|G|973
9QQP|1|m2|A|974
9QQP|1|m2|C|975
9QQP|1|m2|C|976

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain A2

Large subunit ribosomal RNA; LSU rRNA

Chain O3

Small ribosomal subunit protein uS11

Chain p2

40S ribosomal protein S3a