IL_9QQP_243

3D structure

PDB id

9QQP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGGAUCG*CAUGAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQP|1|m2|G|1606
9QQP|1|m2|G|1607
9QQP|1|m2|G|1608
9QQP|1|m2|A|1609
9QQP|1|m2|U|1610
9QQP|1|m2|C|1611
9QQP|1|m2|G|1612
*
9QQP|1|m2|C|1631
9QQP|1|m2|A|1632
9QQP|1|m2|U|1633
9QQP|1|m2|G|1634
9QQP|1|m2|A|1635
9QQP|1|m2|A|1636
9QQP|1|m2|C|1637

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain A3

Small ribosomal subunit protein uS13

Chain B3

40S ribosomal protein S19 (eS19)

Chain s2

Small ribosomal subunit protein uS7