IL_9QQP_245

3D structure

PDB id

9QQP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

G(OMC)CC*G(UR3)AAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMC, UR3

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQP|1|m2|G|1704
9QQP|1|m2|OMC|1705
9QQP|1|m2|C|1706
9QQP|1|m2|C|1707
*
9QQP|1|m2|G|1831
9QQP|1|m2|UR3|1832
9QQP|1|m2|A|1833
9QQP|1|m2|A|1834
9QQP|1|m2|C|1835

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain A2

Large subunit ribosomal RNA; LSU rRNA

Chain Bx

messenger RNA

Chain h2

60S ribosomal protein L41

Chain n2

Transfer RNA; tRNA