IL_9QQQ_136

3D structure

PDB id

9QQQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of SKM-70S ribosomal stalled complex in the major state (vacant A-site, canon)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.26 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQQ|1|a|U|1851
9QQQ|1|a|U|1852
9QQQ|1|a|A|1853
9QQQ|1|a|A|1854
9QQQ|1|a|U|1855
9QQQ|1|a|U|1856
9QQQ|1|a|G|1857
9QQQ|1|a|A|1858
9QQQ|1|a|U|1859
9QQQ|1|a|G|1860
*
9QQQ|1|a|U|1882
9QQQ|1|a|U|1883
9QQQ|1|a|G|1884
9QQQ|1|a|A|1885
9QQQ|1|a|U|1886
9QQQ|1|a|C|1887
9QQQ|1|a|G|1888
9QQQ|1|a|A|1889
9QQQ|1|a|A|1890
9QQQ|1|a|G|1891

Current chains

Chain a

E. coli 23S rRNA

Nearby chains