IL_9QWT_007

3D structure

PDB id

9QWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGAAU*AAAUGUG

Length

12 nucleotides

Bulged bases

9QWT|1|A2|G|119, 9QWT|1|A2|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QWT|1|A2|C|118
9QWT|1|A2|G|119
9QWT|1|A2|A|120
9QWT|1|A2|A|121
9QWT|1|A2|U|122
*
9QWT|1|A2|A|147
9QWT|1|A2|A|148
9QWT|1|A2|A|149
9QWT|1|A2|U|150
9QWT|1|A2|G|151
9QWT|1|A2|U|152
9QWT|1|A2|G|153

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain B1

Large ribosomal subunit protein eL8

Chain C2

5.8S ribosomal RNA; 5.8S rRNA

Chain H1

Large ribosomal subunit protein eL15

Chain b2

Large ribosomal subunit protein uL29