IL_9QWT_010

3D structure

PDB id

9QWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCUCGUGG*CGGC

Length

12 nucleotides

Bulged bases

9QWT|1|A2|C|183, 9QWT|1|A2|U|184, 9QWT|1|A2|G|188

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QWT|1|A2|G|182
9QWT|1|A2|C|183
9QWT|1|A2|U|184
9QWT|1|A2|C|185
9QWT|1|A2|G|186
9QWT|1|A2|U|187
9QWT|1|A2|G|188
9QWT|1|A2|G|189
*
9QWT|1|A2|C|252
9QWT|1|A2|G|253
9QWT|1|A2|G|254
9QWT|1|A2|C|255

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain C2

5.8S ribosomal RNA; 5.8S rRNA

Chain F1

Large ribosomal subunit protein eL13

Chain b2

Large ribosomal subunit protein uL29

Chain d2

Large ribosomal subunit protein eL37