IL_9QWT_016

3D structure

PDB id

9QWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUGAAAC*GUGGAUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QWT|1|A2|G|415
9QWT|1|A2|U|416
9QWT|1|A2|G|417
9QWT|1|A2|A|418
9QWT|1|A2|A|419
9QWT|1|A2|A|420
9QWT|1|A2|C|421
*
9QWT|1|C2|G|13
9QWT|1|C2|U|14
9QWT|1|C2|G|15
9QWT|1|C2|G|16
9QWT|1|C2|A|17
9QWT|1|C2|U|18
9QWT|1|C2|C|19

Current chains

Chain A2

28S ribosomal RNA

Chain C2

5.8S ribosomal RNA

Nearby chains

Chain F2

Large ribosomal subunit protein uL4

Chain J2

Large ribosomal subunit protein uL22

Chain Y2

Large ribosomal subunit protein eL32