IL_9QWT_098

3D structure

PDB id

9QWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGUAAC*GGAUAAG

Length

13 nucleotides

Bulged bases

9QWT|1|A2|U|2635

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QWT|1|A2|C|2622
9QWT|1|A2|G|2623
9QWT|1|A2|U|2624
9QWT|1|A2|A|2625
9QWT|1|A2|A|2626
9QWT|1|A2|C|2627
*
9QWT|1|A2|G|2632
9QWT|1|A2|G|2633
9QWT|1|A2|A|2634
9QWT|1|A2|U|2635
9QWT|1|A2|A|2636
9QWT|1|A2|A|2637
9QWT|1|A2|G|2638

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain j2

Large ribosomal subunit protein eL43

Chain m2

Small subunit ribosomal RNA; SSU rRNA