IL_9QWT_124

3D structure

PDB id

9QWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCA(1MA)G*CGACG

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 1MA

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QWT|1|A2|C|4064
9QWT|1|A2|C|4065
9QWT|1|A2|A|4066
9QWT|1|A2|1MA|4067
9QWT|1|A2|G|4068
*
9QWT|1|A2|C|4078
9QWT|1|A2|G|4079
9QWT|1|A2|A|4080
9QWT|1|A2|C|4081
9QWT|1|A2|G|4082

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain D1

Large ribosomal subunit protein uL16

Chain g2

Ubiquitin-ribosomal protein eL40 fusion protein