IL_9QWT_135

3D structure

PDB id

9QWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

ACAU(PSU)U*ACCAU

Length

11 nucleotides

Bulged bases

9QWT|1|A2|C|4322, 9QWT|1|A2|C|4323

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QWT|1|A2|A|4276
9QWT|1|A2|C|4277
9QWT|1|A2|A|4278
9QWT|1|A2|U|4279
9QWT|1|A2|PSU|4280
9QWT|1|A2|U|4281
*
9QWT|1|A2|A|4321
9QWT|1|A2|C|4322
9QWT|1|A2|C|4323
9QWT|1|A2|A|4324
9QWT|1|A2|U|4325

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain E2

Large ribosomal subunit protein uL3

Chain P2

Large ribosomal subunit protein uL14

Chain Q2

Large ribosomal subunit protein eL24