IL_9QWT_182

3D structure

PDB id

9QWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAUCAA*UGACCACG

Length

14 nucleotides

Bulged bases

9QWT|1|m2|U|363, 9QWT|1|m2|C|401, 9QWT|1|m2|C|402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QWT|1|m2|U|361
9QWT|1|m2|A|362
9QWT|1|m2|U|363
9QWT|1|m2|C|364
9QWT|1|m2|A|365
9QWT|1|m2|A|366
*
9QWT|1|m2|U|398
9QWT|1|m2|G|399
9QWT|1|m2|A|400
9QWT|1|m2|C|401
9QWT|1|m2|C|402
9QWT|1|m2|A|403
9QWT|1|m2|C|404
9QWT|1|m2|G|405

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain E3

Small ribosomal subunit protein uS12

Chain u2

Small ribosomal subunit protein eS8

Chain w2

Small ribosomal subunit protein uS17