IL_9QWT_210

3D structure

PDB id

9QWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AGGUUC*GUU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QWT|1|m2|A|1044
9QWT|1|m2|G|1045
9QWT|1|m2|G|1046
9QWT|1|m2|U|1047
9QWT|1|m2|U|1048
9QWT|1|m2|C|1049
*
9QWT|1|m2|G|1073
9QWT|1|m2|U|1074
9QWT|1|m2|U|1075

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain A2

Large subunit ribosomal RNA; LSU rRNA

Chain D2

Large ribosomal subunit protein uL2

Chain F3

Small ribosomal subunit protein eS26

Chain O3

Small ribosomal subunit protein uS11

Chain j2

Large ribosomal subunit protein eL43