3D structure

PDB id
9QWT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
CGAUGC*GGGCAG
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9QWT|1|m2|C|1100
9QWT|1|m2|G|1101
9QWT|1|m2|A|1102
9QWT|1|m2|U|1103
9QWT|1|m2|G|1104
9QWT|1|m2|C|1105
*
9QWT|1|m2|G|1131
9QWT|1|m2|G|1132
9QWT|1|m2|G|1133
9QWT|1|m2|C|1134
9QWT|1|m2|A|1135
9QWT|1|m2|G|1136

Current chains

Chain m2
18S ribosomal RNA

Nearby chains

Chain F3
Small ribosomal subunit protein eS26
Chain N3
Small ribosomal subunit protein uS15
Chain S3
Small ribosomal subunit protein eS27
Chain o2
Small ribosomal subunit protein uS2
Chain p2
40S ribosomal protein S3a
Chain z2
Small ribosomal subunit protein eS17

Coloring options:

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