3D structure

PDB id
9QWT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
UGCAU*AUG
Length
8 nucleotides
Bulged bases
9QWT|1|m2|C|1333
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9QWT|1|m2|U|1331
9QWT|1|m2|G|1332
9QWT|1|m2|C|1333
9QWT|1|m2|A|1334
9QWT|1|m2|U|1335
*
9QWT|1|m2|A|1500
9QWT|1|m2|U|1501
9QWT|1|m2|G|1502

Current chains

Chain m2
18S ribosomal RNA

Nearby chains

Chain Bv
Transfer RNA; tRNA
Chain Bx
messenger RNA
Chain C3
Small ribosomal subunit protein uS10
Chain H3
Small ribosomal subunit protein uS14
Chain q2
Small ribosomal subunit protein uS3
Chain v2
Small ribosomal subunit protein eS10

Coloring options:

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