IL_9QZP_047

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CAGGG*CGCCGUG

Length

12 nucleotides

Bulged bases

9QZP|1|A2|G|1173, 9QZP|1|A2|C|1192

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|A2|C|1171
9QZP|1|A2|A|1172
9QZP|1|A2|G|1173
9QZP|1|A2|G|1174
9QZP|1|A2|G|1175
*
9QZP|1|A2|C|1190
9QZP|1|A2|G|1191
9QZP|1|A2|C|1192
9QZP|1|A2|C|1193
9QZP|1|A2|G|1194
9QZP|1|A2|U|1195
9QZP|1|A2|G|1196

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain F1

Large ribosomal subunit protein eL13

Chain F2

Large ribosomal subunit protein uL4

Chain H1

Large ribosomal subunit protein eL15

Chain U2

Large ribosomal subunit protein uL15