IL_9QZP_088

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CCUUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

9QZP|1|A2|U|2060

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|A2|C|2057
9QZP|1|A2|C|2058
9QZP|1|A2|U|2059
9QZP|1|A2|U|2060
9QZP|1|A2|G|2061
9QZP|1|A2|A|2062
9QZP|1|A2|A|2063
9QZP|1|A2|G|2064
*
9QZP|1|A2|U|2084
9QZP|1|A2|G|2085
9QZP|1|A2|G|2086
9QZP|1|A2|A|2087
9QZP|1|A2|G|2088

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain C2

5.8S ribosomal RNA; 5.8S rRNA

Chain F2

Large ribosomal subunit protein uL4

Chain S2

Large ribosomal subunit protein uL24

Chain Y2

Large ribosomal subunit protein eL32