IL_9QZP_092

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CUGAG*CGAAAG

Length

11 nucleotides

Bulged bases

9QZP|1|A2|A|2267, 9QZP|1|A2|A|2268

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|A2|C|2201
9QZP|1|A2|U|2202
9QZP|1|A2|G|2203
9QZP|1|A2|A|2204
9QZP|1|A2|G|2205
*
9QZP|1|A2|C|2264
9QZP|1|A2|G|2265
9QZP|1|A2|A|2266
9QZP|1|A2|A|2267
9QZP|1|A2|A|2268
9QZP|1|A2|G|2269

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain C2

5.8S ribosomal RNA; 5.8S rRNA

Chain D2

Large ribosomal subunit protein uL2

Chain a2

Large ribosomal subunit protein eL34

Chain d2

Large ribosomal subunit protein eL37

Chain f2

Large ribosomal subunit protein eL39