IL_9QZP_112

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CGAAGG*UGUUGACG

Length

14 nucleotides

Bulged bases

9QZP|1|A2|A|3319, 9QZP|1|A2|U|3335, 9QZP|1|A2|C|3339

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|A2|C|3316
9QZP|1|A2|G|3317
9QZP|1|A2|A|3318
9QZP|1|A2|A|3319
9QZP|1|A2|G|3320
9QZP|1|A2|G|3321
*
9QZP|1|A2|U|3333
9QZP|1|A2|G|3334
9QZP|1|A2|U|3335
9QZP|1|A2|U|3336
9QZP|1|A2|G|3337
9QZP|1|A2|A|3338
9QZP|1|A2|C|3339
9QZP|1|A2|G|3340

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain D2

Large ribosomal subunit protein uL2

Chain j2

Large ribosomal subunit protein eL43

Chain m2

Small subunit ribosomal RNA; SSU rRNA