IL_9QZP_126

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

GGUGUAGAAUAAG*CUAC

Length

17 nucleotides

Bulged bases

9QZP|1|A2|G|3614, 9QZP|1|A2|U|3615, 9QZP|1|A2|A|3616, 9QZP|1|A2|A|3618

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|A2|G|3611
9QZP|1|A2|G|3612
9QZP|1|A2|U|3613
9QZP|1|A2|G|3614
9QZP|1|A2|U|3615
9QZP|1|A2|A|3616
9QZP|1|A2|G|3617
9QZP|1|A2|A|3618
9QZP|1|A2|A|3619
9QZP|1|A2|U|3620
9QZP|1|A2|A|3621
9QZP|1|A2|A|3622
9QZP|1|A2|G|3623
*
9QZP|1|A2|C|3704
9QZP|1|A2|U|3705
9QZP|1|A2|A|3706
9QZP|1|A2|C|3707

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain L1

Large ribosomal subunit protein uL1

Chain n2

Transfer RNA; tRNA