IL_9QZP_201

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

UAUCAA*UGACCACG

Length

14 nucleotides

Bulged bases

9QZP|1|m2|U|363, 9QZP|1|m2|C|401

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|m2|U|361
9QZP|1|m2|A|362
9QZP|1|m2|U|363
9QZP|1|m2|C|364
9QZP|1|m2|A|365
9QZP|1|m2|A|366
*
9QZP|1|m2|U|398
9QZP|1|m2|G|399
9QZP|1|m2|A|400
9QZP|1|m2|C|401
9QZP|1|m2|C|402
9QZP|1|m2|A|403
9QZP|1|m2|C|404
9QZP|1|m2|G|405

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain E3

Small ribosomal subunit protein uS12

Chain u2

Small ribosomal subunit protein eS8

Chain w2

Small ribosomal subunit protein uS17