IL_9QZP_202

3D structure

PDB id

9QZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome Classical Pre translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

UUUCGAUG*CAUG

Length

12 nucleotides

Bulged bases

9QZP|1|m2|U|370, 9QZP|1|m2|C|371, 9QZP|1|m2|A|394, 9QZP|1|m2|U|395

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QZP|1|m2|U|368
9QZP|1|m2|U|369
9QZP|1|m2|U|370
9QZP|1|m2|C|371
9QZP|1|m2|G|372
9QZP|1|m2|A|373
9QZP|1|m2|U|374
9QZP|1|m2|G|375
*
9QZP|1|m2|C|393
9QZP|1|m2|A|394
9QZP|1|m2|U|395
9QZP|1|m2|G|396

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain A2

Large subunit ribosomal RNA; LSU rRNA

Chain L2

Large ribosomal subunit protein eL19

Chain u2

Small ribosomal subunit protein eS8

Chain w2

Small ribosomal subunit protein uS17