3D structure

PDB id
9QZP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mouse Ribosome Classical Pre translocation state
Experimental method
ELECTRON MICROSCOPY
Resolution
3.43 Å

Loop

Sequence
GAAAAAAUU*ACCGCAGC
Length
17 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9QZP|1|m2|G|809
9QZP|1|m2|A|810
9QZP|1|m2|A|811
9QZP|1|m2|A|812
9QZP|1|m2|A|813
9QZP|1|m2|A|814
9QZP|1|m2|A|815
9QZP|1|m2|U|816
9QZP|1|m2|U|817
*
9QZP|1|m2|A|851
9QZP|1|m2|C|852
9QZP|1|m2|C|853
9QZP|1|m2|G|854
9QZP|1|m2|C|855
9QZP|1|m2|A|856
9QZP|1|m2|G|857
9QZP|1|m2|C|858

Current chains

Chain m2
18S ribosomal RNA

Nearby chains

Chain L3
Small ribosomal subunit protein uS4
Chain P3
Small ribosomal subunit protein uS8
Chain r2
Small ribosomal subunit protein eS4
Chain w2
Small ribosomal subunit protein uS17

Coloring options:

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