IL_9R9P_058
3D structure
- PDB id
- 9R9P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUCAAC*GGAC
- Length
- 10 nucleotides
- Bulged bases
- 9R9P|1|C1|G|1514
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9R9P_058 not in the Motif Atlas
- Homologous match to IL_9PN5_061
- Geometric discrepancy: 0.0951
- The information below is about IL_9PN5_061
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_98911.1
- Basepair signature
- cWW-L-R-tWH-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
9R9P|1|C1|G|1500
9R9P|1|C1|U|1501
9R9P|1|C1|C|1502
9R9P|1|C1|A|1503
9R9P|1|C1|A|1504
9R9P|1|C1|C|1505
*
9R9P|1|C1|G|1513
9R9P|1|C1|G|1514
9R9P|1|C1|A|1515
9R9P|1|C1|C|1516
Current chains
- Chain C1
- 25S ribosomal RNA
Nearby chains
- Chain LP
- 60S ribosomal protein L17-A
- Chain LR
- 60S ribosomal protein L19-A
- Chain Ll
- 60S ribosomal protein L39
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