IL_9R9P_126

3D structure

PDB id

9R9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AGAG*CGAU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9R9P|1|C1|A|3342
9R9P|1|C1|G|3343
9R9P|1|C1|A|3344
9R9P|1|C1|G|3345
*
9R9P|1|C1|C|3360
9R9P|1|C1|G|3361
9R9P|1|C1|A|3362
9R9P|1|C1|U|3363

Current chains

Chain C1

25S ribosomal RNA

Nearby chains

Chain LR

60S ribosomal protein L19-A

Chain SI

40S ribosomal protein S8-A