IL_9R9P_165
3D structure
- PDB id
- 9R9P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAAAAAAUU*AUAUUAGC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9R9P_165 not in the Motif Atlas
- Homologous match to IL_9H3G_194
- Geometric discrepancy: 0.451
- The information below is about IL_9H3G_194
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_59049.5
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
9R9P|1|C2|G|751
9R9P|1|C2|A|752
9R9P|1|C2|A|753
9R9P|1|C2|A|754
9R9P|1|C2|A|755
9R9P|1|C2|A|756
9R9P|1|C2|A|757
9R9P|1|C2|U|758
9R9P|1|C2|U|759
*
9R9P|1|C2|A|791
9R9P|1|C2|U|792
9R9P|1|C2|A|793
9R9P|1|C2|U|794
9R9P|1|C2|U|795
9R9P|1|C2|A|796
9R9P|1|C2|G|797
9R9P|1|C2|C|798
Current chains
- Chain C2
- RNA (1642-MER)
Nearby chains
- Chain SE
- 40S ribosomal protein S4-A
- Chain SJ
- 40S ribosomal protein S9-A
- Chain SL
- 40S ribosomal protein S11-A
- Chain SW
- 40S ribosomal protein S22-A
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