IL_9R9P_165

3D structure

PDB id

9R9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAAAAAAUU*AUAUUAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9R9P|1|C2|G|751
9R9P|1|C2|A|752
9R9P|1|C2|A|753
9R9P|1|C2|A|754
9R9P|1|C2|A|755
9R9P|1|C2|A|756
9R9P|1|C2|A|757
9R9P|1|C2|U|758
9R9P|1|C2|U|759
*
9R9P|1|C2|A|791
9R9P|1|C2|U|792
9R9P|1|C2|A|793
9R9P|1|C2|U|794
9R9P|1|C2|U|795
9R9P|1|C2|A|796
9R9P|1|C2|G|797
9R9P|1|C2|C|798

Current chains

Chain C2

RNA (1642-MER)

Nearby chains

Chain SE

40S ribosomal protein S4-A

Chain SJ

40S ribosomal protein S9-A

Chain SL

40S ribosomal protein S11-A

Chain SW

40S ribosomal protein S22-A