IL_9R9P_175
3D structure
- PDB id
- 9R9P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGAAG*CGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9R9P_175 not in the Motif Atlas
- Homologous match to IL_9PN5_190
- Geometric discrepancy: 0.1751
- The information below is about IL_9PN5_190
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.4
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 21
Unit IDs
9R9P|1|C2|C|990
9R9P|1|C2|G|991
9R9P|1|C2|A|992
9R9P|1|C2|A|993
9R9P|1|C2|G|994
*
9R9P|1|C2|C|1010
9R9P|1|C2|G|1011
9R9P|1|C2|U|1012
9R9P|1|C2|A|1013
9R9P|1|C2|G|1014
Current chains
- Chain C2
- RNA (1642-MER)
Nearby chains
- Chain C1
- Large subunit ribosomal RNA; LSU rRNA
- Chain LA
- 60S ribosomal protein L2-A
- Chain SO
- 40S ribosomal protein S14-A
- Chain Sa
- Small ribosomal subunit protein eS26A
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