IL_9R9P_202

3D structure

PDB id

9R9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUAU*AUGGAAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9R9P|1|C2|C|1389
9R9P|1|C2|U|1390
9R9P|1|C2|A|1391
9R9P|1|C2|U|1392
*
9R9P|1|C2|A|1406
9R9P|1|C2|U|1407
9R9P|1|C2|G|1408
9R9P|1|C2|G|1409
9R9P|1|C2|A|1410
9R9P|1|C2|A|1411
9R9P|1|C2|G|1412

Current chains

Chain C2

RNA (1642-MER)

Nearby chains

Chain SF

40S ribosomal protein S5

Chain SQ

40S ribosomal protein S16-A

Chain SR

40S ribosomal protein S17-B

Chain Sg

Guanine nucleotide-binding protein subunit beta-like protein