IL_9R9P_215
3D structure
- PDB id
- 9R9P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UGAG*CAAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9R9P_215 not in the Motif Atlas
- Homologous match to IL_9H3G_241
- Geometric discrepancy: 0.1171
- The information below is about IL_9H3G_241
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.5
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 50
Unit IDs
9R9P|1|C2|U|1669
9R9P|1|C2|G|1670
9R9P|1|C2|A|1671
9R9P|1|C2|G|1672
*
9R9P|1|C2|C|1729
9R9P|1|C2|A|1730
9R9P|1|C2|A|1731
9R9P|1|C2|A|1732
Current chains
- Chain C2
- RNA (1642-MER)
Nearby chains
- Chain C1
- Large subunit ribosomal RNA; LSU rRNA
- Chain LW
- Large ribosomal subunit protein eL24B
- Chain SG
- 40S ribosomal protein S6-A
- Chain SI
- 40S ribosomal protein S8-A
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