IL_9RG7_122

3D structure

PDB id

9RG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In vitro reconstituted NAA40-NAC bound 80S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CCAAAUGCCUCG*CGCG

Length

16 nucleotides

Bulged bases

9RG7|1|L5|A|3785, 9RG7|1|L5|C|3791, 9RG7|1|L5|C|3810

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RG7|1|L5|C|3781
9RG7|1|L5|C|3782
9RG7|1|L5|A|3783
9RG7|1|L5|A|3784
9RG7|1|L5|A|3785
9RG7|1|L5|U|3786
9RG7|1|L5|G|3787
9RG7|1|L5|C|3788
9RG7|1|L5|C|3789
9RG7|1|L5|U|3790
9RG7|1|L5|C|3791
9RG7|1|L5|G|3792
*
9RG7|1|L5|C|3808
9RG7|1|L5|G|3809
9RG7|1|L5|C|3810
9RG7|1|L5|G|3811

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Ln

60S ribosomal protein L41

Chain S2

Small subunit ribosomal RNA; SSU rRNA